Genome sc|0006278


Database

NCBI Assembly

Accession

GCA_003333265.1

Typification

Nomenclatural type of:

Genomics

Accession
NCBI Assembly:GCA_003333265.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.7%
  • Contamination: 2.15%
  • Quality: 87.95
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 79.0%)
  • 2 23S rRNAs (up to 59.0%)
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 58.71%
  • Coding Density: 86.23%
  • Codon Table: 11
  • N50: 55,069 bp
  • Contigs: 171
  • Largest Contig: 241,866 bp
  • Assembly Length: 4,775,714 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination are based on CheckM v1.0.11

Automated checks
Complete

Last modified about 21 hours ago

Sample Metadata

BioSample entries
Date
Collection Date: 2016
Location
Not detected
Toponym
Geo Loc Name: Brazil
Environment
Env Material: water
Env Biome: ocean basin
Other
Depth: 2570 m
Package
Not detected
All retrieved samples

Metadata retrieved about 22 hours ago

Sequencing Experiments

Mapped reads for Bin25_node5_metabat


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