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“Halocynthiibacter alkanivorans”

This name was automatically created through literature mining, and it currently has no standing or validity.
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Citation

Formal styling
“Halocynthiibacter alkanivorans” Campeão et al., 2019
Effective publication
Campeão et al., 2019
SeqCode status
Automated discovery
Canonical URL
https://seqco.de/i:273

Nomenclature

Rank
Species
Syllabication
al.ka.ni.vo'rans
Etymology
N.L. neut. n. alkanum, alkane; L. pres. part. vorans, devouring; N.L. part. adj. alkanivorans, devouring alkanes
Nomenclatural type
Genome sc|0006278 Ts

Taxonomy

Description
Campeão et al. (2019): In silico-predicted phenotypes indicate that the novel species produces acid from d-ribose, sucrose, and glycerol. Acetate is utilized, nitrate is reduced, and indole is produced. The G+C content is 59%.
Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » Rhodobacterales » Paracoccaceae » Halocynthiibacter » “Halocynthiibacter alkanivorans”
Parent
Halocynthiibacter

Genomics

Accession
NCBI Assembly: GCA_003333265.1 [NCBI | EMBL]
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.7%
  • Contamination: 2.15%
  • Quality: 87.95
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 79.0%)
  • 2 23S rRNAs (up to 59.0%)
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 58.71%
  • Coding Density: 86.23%
  • Codon Table: 11
  • N50: 55,069 bp
  • Contigs: 171
  • Largest Contig: 241,866 bp
  • Assembly Length: 4,775,714 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination are based on CheckM v1.0.11

Automated checks
Complete
See additional details
Last modified 18 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 7 years ago and claimed 18 days ago by Nguyen, Huong

Publications
1

Citation Title
Campeão et al., 2019, Microbiology Resource Announcements “ Candidatus Colwellia aromaticivorans” sp. nov., “ Candidatus Halocyntiibacter alkanivorans” sp. nov., and “ Candidatus Ulvibacter alkanivorans” sp. nov. Genome Sequences
Effective publication


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