Genome sc|0006279


Database

NCBI Assembly

Accession

GCA_003333325.1

Typification

Nomenclatural type of:

Genomics

Accession
NCBI Assembly:GCA_003333325.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 93.1%
  • Contamination: 0.2%
  • Quality: 92.1
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 40.4%
  • Coding Density: 92.47%
  • Codon Table: 11
  • N50: 47,750 bp
  • Contigs: 117
  • Largest Contig: 218,740 bp
  • Assembly Length: 2,762,405 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination estimated with CheckM (v1.0.11)
Automated checks
Complete

Last modified about 21 hours ago

Sample Metadata

BioSample entries
Date
Collection Date: 2016
Location
Not detected
Toponym
Geo Loc Name: Brazil
Environment
Env Material: water
Env Biome: ocean basin
Other
Depth: 2570 m
Package
Not detected
All retrieved samples

Metadata retrieved about 21 hours ago

Sequencing Experiments

Mapped reads for Bin25_node4_metabat


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