Genome sc|0000064

Genomics

Accession

NCBI Assembly:GCA_023267885.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 98.54%
• Contamination: 0.97%
• Quality: 93.69

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

10.0 ×

Source

• BioSample: SAMN26029314
• BioSample: SAMN15683644

Other features

• G+C Content: 47.5%
• Coding Density: 91.55%
• Codon Table: 11
• N50: 37,601 bp
• Contigs: 50
• Largest Contig: 115,469 bp
• Assembly Length: 1,273,736 bp
• Ambiguous Assembly Fraction: 0.0055%

Automated checks

Complete

---

Last modified 20 days ago

Sample Metadata

BioSample entries

• BioSample: SAMN26029314
• BioSample: SAMN15683644

Date

Collection Date: 2018-08

Location

Lat Lon: 23.44111 N 98.46000 E • 25.44111 N 98.46000 E

Toponym

Geo Loc Name: China: Tengchong, Jinze hot spring

Environment

Sample Type: metagenomic assembly

Isolation Source: hot springs sediment

Env Broad Scale: hot spring biome

Other

Ph: 8

Temperature: 51.8

Package

Ncbi Submission Package: MIMAG.sediment.6.0 • Metagenome.environmental.1.0

Biosamplemodel: MIMAG.sediment • Metagenome or environmental

All retrieved samples

• SAMN26029314: MIMAG Metagenome-assembled Genome sample from Candidatus Terraquivivens ruidianensis
• SAMN15683644: Metagenome or environmental sample from Jinze hot spring (JZ-2) 2018.08

---

Metadata retrieved 20 days ago