JSON

Genome sc|0006421 Ts

Name

“Solincola sediminis”

Database

NCBI Assembly

Accession

GCA_001767605.1

Typification

Nomenclatural type of:

Genomics

Accession
NCBI Assembly: GCA_001767605.1 [NCBI | EMBL]
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.3%
  • Contamination: 0.9%
  • Quality: 90.8
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Source
Other features
  • G+C Content: 54.1%
  • Coding Density: 90.35%
  • Codon Table: 11
  • N50: 62,564 bp
  • Contigs: 63
  • Largest Contig: 194,939 bp
  • Assembly Length: 2,554,379 bp
  • Ambiguous Assembly Fraction: 0.84%
Automated checks
Complete
Last modified about 3 hours ago

Sample Metadata

BioSample entries
Date
Collection Date: 2007-07-07
Location
Lat Lon: 39° 32′ 13″ N, 107° 46′ 58″ W
View map of sampling locations
Toponym
Geo Loc Name: USA: Rifle, CO
Environment
Isolation Source: Rifle background sediment; well D04 at 16ft depth
Other
Not detected
Package
Not detected
All retrieved samples
Metadata retrieved about 4 hours ago


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