Genome sc|0000065

Genomics

Accession

NCBI Assembly:GCA_023261845.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 97.09%
• Contamination: 0.0%
• Quality: 97.09

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

13.0 ×

Source

• BioSample: SAMN26029286
• BioSample: SAMN27648475

Other features

• G+C Content: 45.0%
• Coding Density: 90.96%
• Codon Table: 11
• N50: 143,382 bp
• Contigs: 14
• Largest Contig: 252,196 bp
• Assembly Length: 1,221,916 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

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Last modified about 1 month ago

Sample Metadata

BioSample entries

• BioSample: SAMN26029286
• BioSample: SAMN27648475

Date

Collection Date: 2019-07

Location

Lat Lon: 24.95093 N 98.43626 E

Toponym

Geo Loc Name: China: Tengchong, Gumingquan hot spring

Environment

Sample Type: metagenomic assembly

Isolation Source: hot springs sediment

Env Broad Scale: hot spring biome

Other

Not detected

Package

Ncbi Package: Metagenome.environmental.1.0

Ncbi Submission Package: MIMAG.sediment.6.0

Biosamplemodel: MIMAG.sediment

All retrieved samples

• SAMN26029286: MIMAG Metagenome-assembled Genome sample from Candidatus Terraquivivens tengchongensis
• SAMN27648475: GMQP_201907

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Metadata retrieved about 1 month ago