Genome sc|0000068


Database

NCBI Assembly

Accession

GCA_023539495.1

Genomics

Accession
NCBI Assembly:GCA_023539495.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.23%
  • Contamination: 0.0%
  • Quality: 92.23
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 2 23S rRNAs (up to 50.0%)
  • tRNAs for 20 amino acids
Sequencing depth
27.0 ×
Source
Other features
  • G+C Content: 51.6%
  • Coding Density: 89.06%
  • Codon Table: 11
  • N50: 21,863 bp
  • Contigs: 95
  • Largest Contig: 59,083 bp
  • Assembly Length: 1,315,737 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2019
Location
Lat Lon: 44.56963 N 110.86518 W
Toponym
Geo Loc Name: USA: Yellowstone National Park
Environment
Isolation Source: hot spring sediment from LGB-01 spring
Env Broad Scale: ENVO:00000051
Env Local Scale: ENVO:0000207
Env Medium: ENVO:0000207
Other
Depth: 1-20 cm
Package
Ncbi Submission Package: MIMS.me.sediment.6.0
Biosamplemodel: MIGS/MIMS/MIMARKS.sediment
All retrieved samples

Metadata retrieved 5 months ago


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