Genome sc|0000007


Database

NCBI Assembly

Accession

GCA_021650775.1

Genomics

Accession
NCBI Assembly:GCA_021650775.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 94.0%
  • Contamination: 2.94%
  • Quality: 79.3
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
34.0 ×
Source
Other features
  • G+C Content: 54.8%
  • Coding Density: 93.81%
  • Codon Table: 11
  • N50: 19,743 bp
  • Contigs: 112
  • Largest Contig: 63,947 bp
  • Assembly Length: 1,470,116 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015-05-10
Location
Lat Lon: 21.9904 S 176.5692 W
Toponym
Geo Loc Name: Pacific Ocean
Environment
Isolation Source: hydrothermal vent deposit
Other
Not detected
Package
Ncbi Submission Package: Metagenome.environmental.1.0
Biosamplemodel: Metagenome or environmental
All retrieved samples

Metadata retrieved 5 months ago


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