Genome sc|0000007

Genomics

Accession

NCBI Assembly:GCA_021650775.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 94.0%
• Contamination: 2.94%
• Quality: 79.3

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

34.0 ×

Source

• SRA: SRX10856250

Other features

• G+C Content: 54.8%
• Coding Density: 93.81%
• Codon Table: 11
• N50: 19,743 bp
• Contigs: 112
• Largest Contig: 63,947 bp
• Assembly Length: 1,470,116 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

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Last modified 2 months ago

Sample Metadata

BioSample entries

• BioSample: SAMN10217877

Date

Collection Date: 2015-05-10

Location

Lat Lon: 21.9904 S 176.5692 W

Toponym

Geo Loc Name: Pacific Ocean

Environment

Isolation Source: hydrothermal vent deposit

Other

Not detected

Package

Ncbi Submission Package: Metagenome.environmental.1.0

Biosamplemodel: Metagenome or environmental

All retrieved samples

• SAMN10217877: J2-819-10-R1

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Metadata retrieved 2 months ago