Metadata as EBI XML
<EXPERIMENT_SET>
<EXPERIMENT accession="SRX5795394" alias="A511R1" center_name="SUB5569592" broker_name="NCBI">
<IDENTIFIERS>
<PRIMARY_ID>SRX5795394</PRIMARY_ID>
<SUBMITTER_ID namespace="SUB5569592">A511R1</SUBMITTER_ID>
</IDENTIFIERS>
<TITLE>WGS of Vibrio tetraodonis: isolated from fish skin</TITLE>
<STUDY_REF accession="SRP195525">
<IDENTIFIERS>
<PRIMARY_ID>SRP195525</PRIMARY_ID>
<EXTERNAL_ID namespace="BioProject">PRJNA476514</EXTERNAL_ID>
</IDENTIFIERS>
</STUDY_REF>
<DESIGN>
<DESIGN_DESCRIPTION>Libraries were built by using the Nextera XT Sample Preparation Kit (Illumina). DNA was simultaneously fragmented and tagged with sequencing adapters. The library size distribution was accessed using the 2100 Bioanalyzer and the High Sensitivity DNA Kit (Agilent). The accurate quantification of the library was accomplished using the 7500 Real Time PCR (Applied Biosystems) and the KAPA Library Quantification Kit (Kapabiosystems). Paired-end (2250 bp) sequencing was performed on a MiSeq (Illumina) using the MiSeq reagent kit v2 (500 cycles). The complex DNA was sequenced using Illumina MiSeq in the sequencing unity of SAGE, COPPE, UFRJ, Brazil.</DESIGN_DESCRIPTION>
<SAMPLE_DESCRIPTOR accession="SRS4726679">
<IDENTIFIERS>
<PRIMARY_ID>SRS4726679</PRIMARY_ID>
<EXTERNAL_ID namespace="BioSample">SAMN09437379</EXTERNAL_ID>
</IDENTIFIERS>
</SAMPLE_DESCRIPTOR>
<LIBRARY_DESCRIPTOR>
<LIBRARY_NAME>A511R1</LIBRARY_NAME>
<LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
<LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
<LIBRARY_SELECTION>other</LIBRARY_SELECTION>
<LIBRARY_LAYOUT>
<PAIRED/>
</LIBRARY_LAYOUT>
</LIBRARY_DESCRIPTOR>
</DESIGN>
<PLATFORM>
<ILLUMINA>
<INSTRUMENT_MODEL>Illumina MiSeq</INSTRUMENT_MODEL>
</ILLUMINA>
</PLATFORM>
<EXPERIMENT_LINKS>
<EXPERIMENT_LINK>
<XREF_LINK>
<DB>ENA-SAMPLE</DB>
<ID>SRS4726679</ID>
</XREF_LINK>
</EXPERIMENT_LINK>
<EXPERIMENT_LINK>
<XREF_LINK>
<DB>ENA-SUBMISSION</DB>
<ID>SRA882702</ID>
</XREF_LINK>
</EXPERIMENT_LINK>
<EXPERIMENT_LINK>
<XREF_LINK>
<DB>ENA-FASTQ-FILES</DB>
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</XREF_LINK>
</EXPERIMENT_LINK>
<EXPERIMENT_LINK>
<XREF_LINK>
<DB>ENA-SUBMITTED-FILES</DB>
<ID><![CDATA[https://www.ebi.ac.uk/ena/portal/api/filereport?accession=SRX5795394&result=read_run&fields=run_accession,submitted_ftp,submitted_md5,submitted_bytes,submitted_format]]></ID>
</XREF_LINK>
</EXPERIMENT_LINK>
</EXPERIMENT_LINKS>
</EXPERIMENT>
</EXPERIMENT_SET>
Metadata retrieved about 1 month ago