SeqCode Registry
cognitis nomina
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Genomes
sc|0000816
JSON
Genome sc|0000816
Name
Vibrio tetraodonis
Database
NCBI Assembly
Accession
GCA_003350295.1
Genomics
Accession
NCBI Assembly:
GCA_003350295.1
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
100.0%
Contamination:
1.9%
Quality:
90.5
Ribosomal and transfer RNA genes
3 16S rRNAs (up to 53.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 20 amino acids
Sequencing depth
145.0 ×
Source
BioSample: SAMN09437379
Other features
G+C Content:
42.5%
Coding Density:
87.69%
Codon Table:
11
N50:
183,738 bp
Contigs:
41
Largest Contig:
460,678 bp
Assembly Length:
4,360,861 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Sample Metadata
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Not detected
All retrieved samples
SAMN09437379
:
Metadata retrieved
10 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMN09437379
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