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Vibrio tetraodonis

Citation

Formal styling
Vibrio tetraodonis Azevedo et al., 2021 (priority 2023)
Effective publication
Azevedo et al., 2021
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:1_urr4c2 (validated)
Canonical URL
https://seqco.de/i:32636

Nomenclature

Rank
Species
Syllabication
tet'rao.do.nis
Etymology
L. gen. n. tetraodonis, of Tetraodon, a genus of plectognathic fishes (Tetraodontidae)
Nomenclatural type
NCBI Assembly: GCA_003350295.1
Reference strain
Strain sc|0040365: A511T = CBAS 712T = CAIM 1939T Lookup StrainInfo
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Gram-negative, motile, circular-shaped bacterial strain. Optimum growth occurs at
20–28 °C in the presence of 3% NaCl.
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » Vibrionales » Vibrionaceae » Vibrio » Vibrio tetraodonis
Parent
Vibrio ncbigtdb
Children (1)

Genomics

Accession
NCBI Assembly:GCA_003350295.1
Cultures
Strain sc|0040365
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 1.9%
  • Quality: 90.5
Ribosomal and transfer RNA genes
  • 3 16S rRNAs (up to 53.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
145.0 ×
Source
Other features
  • G+C Content: 42.5%
  • Coding Density: 87.69%
  • Codon Table: 11
  • N50: 183,738 bp
  • Contigs: 41
  • Largest Contig: 460,678 bp
  • Assembly Length: 4,360,861 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details
Last modified 3 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
About 2 years ago by Kaufmann, Hannah
Submitted
Almost 2 years ago by Kaufmann, Hannah
Curators
Validated
Almost 2 years ago by Rodriguez-R, Luis M
Date of priority
2023-12-08 12:20 AM (UTC)

Publications
1

Citation Title
Azevedo et al., 2021, Archives of Microbiology Vibrio tetraodonis sp. nov.: genomic insights on the secondary metabolites repertoire
Effective publication


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seqco.de/r:1_urr4c2