SeqCode Registry
cognitis nomina
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Genomes
sc|0000850
JSON
Genome sc|0000850
Name
Sororendozoicomonas aggregata
Ts
Database
NCBI Assembly
Accession
GCA_031528575.1
Genomics
Accession
NCBI Assembly:
GCA_031528575.1
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
97.13%
Contamination:
0.88%
Quality:
92.73
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 20 amino acids
Sequencing depth
61.0 ×
Source
BioSample: SAMN37218445
Other features
G+C Content:
46.7%
Coding Density:
79.58%
Codon Table:
11
N50:
37,409 bp
Contigs:
201
Largest Contig:
102,874 bp
Assembly Length:
4,041,637 bp
Ambiguous Assembly Fraction:
0.0%
Submitter comments
Completeness and contamination were assessed with CheckM v1.2.2
rRNA genes were detected via annotation with Bakta v1.7.0
Automated checks
Complete
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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