JSONPDF

Norongarragalina meridionalisTs

Citation

Formal styling
Norongarragalina meridionalisTs Vázquez-Campos et al., 2021 (priority 2025)
Effective publication
Vázquez-Campos et al., 2021
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:nsvepduf (validated)
Canonical URL
https://seqco.de/i:23475

Nomenclature

Rank
Species
Syllabication
me.ri.dio.na'lis
Etymology
L. fem. adj. meridionalis, southern, referring to the Southern hemisphere, where its first genome was reconstructed
Nomenclatural type
NCBI Assembly: GCA_902384935.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The type material is the metagenome assembled genome (MAG) LFW-144_1 (ERS2655293) recovered from the groundwater of the Little Forest Legacy Site (NSW, Australia). The MAG consists of 0.93 Mbp in 49 contigs with an estimated completeness of 93.5%, redundancy of 1.1%, 16S and 5S rRNA gene, and 20 tRNAs. The GC content of this MAG is 57.5%.
The type material appears in GTDB r202 (Parks et al., 2017) as reference for s__0-14-0-20-59-11 sp902384935.
Classification
Archaea » Microcaldota » Microcaldia » Norongarragalinales » Norongarragalinaceae » Norongarragalina » Norongarragalina meridionalisTs
Parent
Norongarragalina gtdb
Pseudonyms
  • 0-14-0-20-59-11 sp902384935 (Alphanumeric placeholder accession)

Genomics

Accession
NCBI Assembly:GCA_902384935.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.2%
  • Contamination: 0.0%
  • Quality: 96.2
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 30.0%)
  • tRNAs for 18 amino acids
Sequencing depth
10.1 ×
Source
Other features
  • G+C Content: 57.5%
  • Coding Density: 93.64%
  • Codon Table: 11
  • N50: 74,768 bp
  • Contigs: 23
  • Largest Contig: 187,035 bp
  • Assembly Length: 926,732 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details
Last modified 6 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 3 years ago by Vázquez-Campos, Xabier
Submitted
7 months ago by Vázquez-Campos, Xabier
Curators
Validated
11 days ago by St. John, Emily
Date of priority
2025-05-22 09:24 AM (UTC)

Publications
1

Citation Title
Vázquez-Campos et al., 2021, Frontiers in Microbiology Genomic Insights Into the Archaea Inhabiting an Australian Radioactive Legacy Site
Effective publication


© 2022-2025 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license
seqco.de/r:nsvepduf