Pristimantibacillus lignocellulolyticus^Ts

Citation

Formal styling

Pristimantibacillus lignocellulolyticus^Ts Díaz Rodríguez et al., 2022

Effective publication

Díaz Rodríguez et al., 2022

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:xwx6hrsf (validated)

Canonical URL

https://seqco.de/i:23510

Nomenclature

Rank

Species

Syllabication

lig.no.cel.lu.lo.ly'ti.cus

Etymology

N.L. neut. n. lignocellulosum, lignocellulose; N.L. masc. adj. lyticus, (from Gr. masc. adj. lytikos) able to dissolve; N.L. masc. adj. lignocellulolyticus, capable of degrading lignocellulose as part of a lignocellulolytic bacterial consortium

Nomenclatural type

INSDC Nucleotide: CP097899.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

The species is established on the same basis as the genus and the type material is the genome MAG5.

Classification

Bacteria » Bacillota » Bacilli » Caryophanales » Paenibacillaceae » Pristimantibacillus » Pristimantibacillus lignocellulolyticus^Ts

Parent

Pristimantibacillus gtdb

Genomics

Accession

INSDC Nucleotide:CP097899.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 98.0%
• Contamination: 0.7%
• Quality: 94.5

Ribosomal and transfer RNA genes

• 8 16S rRNAs (up to 100.0%)
• 8 23S rRNAs (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

123.0 ×

Source

• BioSample: SAMN28659477

Other features

• G+C Content: 37.8%
• Coding Density: 85.47%
• Codon Table: 11
• N50: 5,268,630 bp
• Contigs: 1
• Largest Contig: 5,268,630 bp
• Assembly Length: 5,268,630 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

Metadata

Outside links and data sources

• GTDB Tree: s__Pristimantibacillus lignocellulolyticus
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Pristimantibacillus lignocellulolyticus (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 28 days ago
• Submission process status
• Quality checks before valid publication

Registered by

Jimenez, Diego over 2 years ago

Submitted by

Jimenez, Diego about 2 years ago

Curators

• Palmer, Marike
• Chuvochina, Maria (nomenclature)

Endorsed by

Palmer, Marike about 2 years ago

Validated by

Palmer, Marike about 2 years ago

Date of priority

2022-09-29 07:00 AM (UTC)