JSONPDF

Pristimantibacillus lignocellulolyticusTs

Citation

Formal styling
Pristimantibacillus lignocellulolyticusTs Díaz Rodríguez et al., 2022
Effective publication
Díaz Rodríguez et al., 2022
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:xwx6hrsf (validated)
Canonical URL
https://seqco.de/i:23510

Nomenclature

Rank
Species
Syllabication
lig.no.cel.lu.lo.ly'ti.cus
Etymology
N.L. neut. n. lignocellulosum, lignocellulose; N.L. masc. adj. lyticus, (from Gr. masc. adj. lytikos) able to dissolve; N.L. masc. adj. lignocellulolyticus, capable of degrading lignocellulose as part of a lignocellulolytic bacterial consortium
Nomenclatural type
INSDC Nucleotide: CP097899
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The species is established on the same basis as the genus and the type material is the genome MAG5.
Classification
Bacteria » Bacillota » Bacilli » Caryophanales » Paenibacillaceae » Pristimantibacillus » Pristimantibacillus lignocellulolyticusTs
Parent
Pristimantibacillus
Alternative placements

Genomics

Accession
INSDC Nucleotide:CP097899
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.0%
  • Contamination: 0.7%
  • Quality: 94.5
Ribosomal and transfer RNA genes
  • 8 16S rRNAs (up to 100.0%)
  • 8 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
123.0 ×
Source
Other features
  • G+C Content: 37.8%
  • Coding Density: 85.47%
  • Codon Table: 11
  • N50: 5,268,630 bp
  • Contigs: 1
  • Largest Contig: 5,268,630 bp
  • Assembly Length: 5,268,630 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details
Last modified about 1 year ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 3 years ago by Jimenez, Diego
Submitted
About 3 years ago by Jimenez, Diego
Curators
Endorsed
About 3 years ago by Palmer, Marike
Validated
About 3 years ago by Palmer, Marike
Date of priority
2022-09-29 07:00 AM (UTC)

Publications
1

Citation Title
Díaz Rodríguez et al., 2022, ISME Communications Novel bacterial taxa in a minimal lignocellulolytic consortium and their potential for lignin and plastics transformation
Effective publication


© 2022-2025 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license
seqco.de/r:xwx6hrsf