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Methanocatella oralis

Citation

Formal styling
Methanocatella oralis Protasov et al., 2023 (priority 2024)
Effective publication
Protasov et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:hfttq0ec (validated)
Canonical URL
https://seqco.de/i:32436

Nomenclature

Rank
Species
Syllabication
o.ra'lis
Etymology
L. fem. adj. oralis, pertaining to the mouth
Nomenclatural type
NCBI Assembly: GCF_001639275.1
Reference strain
Strain sc|0038590: ZR = DSM 7256 = JCM 30027 Lookup StrainInfo
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Cells are short, oval rods with tapered ends, 0.4–0.5 μm in width and 0.7–1.2 μm in length, occurring most frequently in pairs or short chains. Cells give a Gram-positive reaction when less than 4 d old. Ultrathin sections show a tristratified cell wall that is highly invaginated. Nonmotile (as in Miller, 2015). The G+C content of the type genome is 27.7 mol%, and the genome size is 2.14 Mbp. 
Classification
Archaea » Methanobacteriota » Methanobacteria » Methanobacteriales » Methanobacteriaceae » Methanocatella » Methanocatella oralis
Parent
Methanocatella gtdb
Alternative placements

Genomics

Accession
NCBI Assembly:GCF_001639275.1
Cultures
Strain sc|0038590
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
179.0 ×
Source
Other features
  • G+C Content: 27.71%
  • Coding Density: 83.99%
  • Codon Table: 11
  • N50: 45,270 bp
  • Contigs: 136
  • Largest Contig: 154,300 bp
  • Assembly Length: 2,140,433 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Methanobrevibacter oralis
Automated checks
Complete
See additional details
Last modified 11 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 2 years ago by Protasov, Evgenii
Submitted
Over 1 year ago by Protasov, Evgenii
Curators
Validated
Over 1 year ago by Rodriguez-R, Luis M
Date of priority
2024-04-16 06:48 PM (UTC)

Publications
2

Citation Title
Protasov et al., 2023, Frontiers in Microbiology Diversity and taxonomic revision of methanogens and other archaea in the intestinal tract of terrestrial arthropods
Effective publication
Ferrari et al., 1994, Current Microbiology Isolation and characterization ofMethanobrevibacter oralis sp. nov


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seqco.de/r:hfttq0ec