JSONPDF

Methanobinarius endosymbioticus

This name contravenes at least one rule from the SeqCode, and it's at risk of being rejected:
  • Missing source data: The raw sequencing data should be available in INSDC databases (e.g., Sequence Read Archive)

Citation

Formal styling
Methanobinarius endosymbioticus Protasov et al., 2023 (priority 2024)
Effective publication
Protasov et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:hfttq0ec (validated)
Canonical URL
https://seqco.de/i:32444

Nomenclature

Rank
Species
Syllabication
en.do.sym.bi.o'ti.cus
Etymology
Gr. pref. endo-, within; N.L. masc. adj. symbioticus, living together; N.L. masc. adj. endosymbioticus, living together within (another organism)
Nomenclatural type
NCBI Assembly: GCA_003315655.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The species identified by metagenomic analyses. The G+C content of the type genome is 25.2 mol%, and the genome size is 1.91 Mbp.
Classification
Archaea » Methanobacteriota » Methanobacteria » Methanobacteriales » Methanobacteriaceae » Methanobinarius » Methanobinarius endosymbioticus
Parent
Methanobinarius gtdb

Genomics

Accession
NCBI Assembly:GCA_003315655.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.6%
  • Contamination: 0.13%
  • Quality: 96.95
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
900.0 ×
Source
Other features
  • G+C Content: 25.26%
  • Coding Density: 68.95%
  • Codon Table: 11
  • N50: 62,807 bp
  • Contigs: 70
  • Largest Contig: 232,730 bp
  • Assembly Length: 1,913,772 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Methanobrevibacter sp. NOE 
Automated checks
Complete
See additional details
Last modified 9 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Almost 3 years ago by Protasov, Evgenii
Submitted
Over 2 years ago by Protasov, Evgenii
Curators
Validated
About 2 years ago by Rodriguez-R, Luis M
Date of priority
2024-04-16 06:48 PM (UTC)

Publications
1

Citation Title
Protasov et al., 2023, Frontiers in Microbiology Diversity and taxonomic revision of methanogens and other archaea in the intestinal tract of terrestrial arthropods
Effective publication


© 2022-2026 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license
seqco.de/r:hfttq0ec