Mesorhizobium album


Citation

Formal styling
Mesorhizobium album van Lill et al., 2024
Effective publication
van Lill et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:3oauw4q0 (validated)
Cannonical URL
https://seqco.de/i:32771

Nomenclature

Rank
Species
Syllabication
al'bum
Etymology
L. neut. adj. album, referring to the white colonies of the type strain on YM agar.
Nomenclatural type
NCBI Assembly: GCA_033977205.1
Reference strain
VK24D
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Cells are Gram-negative, motile rods. On YM agar, following 5 days of incubation at 28 °C, the colonies are circular, white, opaque with entire margins and convex elevations with viscid consistency. The strain was able to grow in the pH range of 6 to 9 and tolerate a NaCl concentration of 0.3 % to 2.5 %. The strain can grow at 15 °C to 40 °C. The strain tested positive for the ability to reduce nitrates to nitrites and nitrogen, arginine, urea, esculin and gelatin hydrolysis. The strain could assimilate 4-nitrophenyl-β,D-galactopyranoside, D-glucose, L-arabinose, potassium gluconate, malic acid and phenylacetic acid. The strain could utilize dextrin, D-maltose, D-trehalose, D-cellubiose, gentiobiose, sucrose, D-turanose, stachyose, D-raffinose, α-D-lactose, β -methyl-D glucoside, α-D-glucose, D-mannose, D-fructose, D-galactose, 3-methyl glucose, D-fucose, L- fucose, L-rhamnose, inosine, D-serine, gelatin, Glycyl-L-proline, L-alanine, L-arginine, L-aspartic acid, L-glutamic acid, L-histidine, L-pyroglutamic acid, L-serine, guanidine HCl, Niaproof 4, D-galacturonic acid, L-galactonic acid lactone, D-gluconic acid, glucuronamide, mucic acid, quinic acid, D-saccharic acid, the reduction of tetrazolium blue, methyl pyruvate, D-lactic acid methyl ester, L-lactic acid, D- malic acid, L-malic acid, bromo-succinic acid, nalidixic acid, potassium tellurite, Tween 40, acetoacetic acid and acetic acid sole sources of carbon. The strain was able to form effective symbiosis with V. karroo.
Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » Hyphomicrobiales » Phyllobacteriaceae » Mesorhizobium » Mesorhizobium album
Parent
Mesorhizobium

Genomics

Accession
NCBI Assembly:GCA_033977205.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 99.1%
  • Contamination: 0.9%
  • Quality: 94.6
Ribosomal and transfer RNA genes
  • 2 16S rRNAs (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
144.5 ×
Source
Other features
  • G+C Content: 63.26%
  • Coding Density: 86.06%
  • Codon Table: 11
  • N50: 123,883 bp
  • Contigs: 169
  • Largest Contig: 381,941 bp
  • Assembly Length: 7,211,859 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Van Lill, Melandre 8 months ago
Submitted by
Van Lill, Melandre 6 months ago
Curators
Endorsed by
Rodriguez-R, Luis M 3 months ago
Validated by
Rodriguez-R, Luis M about 2 months ago
Date of priority
2024-04-27 05:48 AM (UTC)

Publications
1

Citation Title
van Lill et al., 2024, Systematic and Applied Microbiology SeqCode facilitates naming of South African rhizobia left in limbo
Effective publication



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