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Endomicrobium neocapritermitis

Citation

Formal styling
Endomicrobium neocapritermitis Mies et al., 2024
Effective publication
Mies et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:tm1bm3q2 (validated)
Canonical URL
https://seqco.de/i:32905

Nomenclature

Rank
Species
Syllabication
ne.o.ca.pri.ter'mi.tis
Etymology
N.L. gen. n. neocapritermitis, of Neocapritermes, referring to the termite host genus.
Nomenclatural type
NCBI Assembly: GCA_009778325.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The species comprises only metagenome-assembled genomes. The species includes all bacteria with more than 95% average nucleotide identity (ANI) to the type genome. The GC content of the type genome is 39.7 mol% and the estimated genome size is 2.4 Mbp.
Classification
Bacteria » Elusimicrobiota » Endomicrobiia » Endomicrobiales » Endomicrobiaceae » Endomicrobium » Endomicrobium neocapritermitis
Parent
Endomicrobium

Genomics

Accession
NCBI Assembly:GCA_009778325.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.75%
  • Contamination: 1.12%
  • Quality: 92.15
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 1 23S rRNA (up to 30.0%)
  • tRNAs for 19 amino acids
Sequencing depth
189.8 ×
Source
Other features
  • G+C Content: 39.7%
  • Coding Density: 91.17%
  • Codon Table: 11
  • N50: 60,537 bp
  • Contigs: 54
  • Largest Contig: 153,372 bp
  • Assembly Length: 2,380,768 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Mies, Undine Sophie 11 months ago
Submitted by
Mies, Undine Sophie 4 months ago
Curators
Validated by
Rodriguez-R, Luis M 4 months ago
Date of priority
2024-05-29 02:02 PM (UTC)

Publications
1

Citation Title
Mies et al., 2024, mBio Genome reduction and horizontal gene transfer in the evolution of Endomicrobia—rise and fall of an intracellular symbiosis with termite gut flagellates
Effective publication


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