JSONPDF

Endomicrobium procryptotermitis

Citation

Formal styling
Endomicrobium procryptotermitis Mies et al., 2024
Effective publication
Mies et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:tm1bm3q2 (validated)
Canonical URL
https://seqco.de/i:32907

Nomenclature

Rank
Species
Syllabication
pro.cryp.to.ter'mi.tis
Etymology
N.L. gen. n. procryptotermitis, of Procryptotermes, referring to the termite host genus.
Nomenclatural type
NCBI Assembly: GCA_031279415.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The species comprises only metagenome-assembled genomes. The species includes all bacteria with more than 95% average nucleotide identity (ANI) to the type genome. The GC content of the type genome is 36.3 mol% and the estimated genome size is 2.1 Mbp.
Classification
Bacteria » Elusimicrobiota » Endomicrobiia » Endomicrobiales » Endomicrobiaceae » Endomicrobium » Endomicrobium procryptotermitis
Parent
Endomicrobium

Genomics

Accession
NCBI Assembly:GCA_031279415.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.69%
  • Contamination: 0.0%
  • Quality: 97.69
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 58.0%)
  • 1 23S rRNA (up to 7.0%)
  • tRNAs for 19 amino acids
Sequencing depth
98.0 ×
Source
Other features
  • G+C Content: 36.3%
  • Coding Density: 90.83%
  • Codon Table: 11
  • N50: 64,079 bp
  • Contigs: 46
  • Largest Contig: 266,684 bp
  • Assembly Length: 2,009,061 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details
Last modified about 1 month ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Mies, Undine Sophie about 1 year ago
Submitted by
Mies, Undine Sophie 7 months ago
Curators
Validated by
Rodriguez-R, Luis M 7 months ago
Date of priority
2024-05-29 02:02 PM (UTC)

Publications
1

Citation Title
Mies et al., 2024, mBio Genome reduction and horizontal gene transfer in the evolution of Endomicrobia—rise and fall of an intracellular symbiosis with termite gut flagellates
Effective publication


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license