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Endomicrobiellum agilis

Citation

Formal styling
Endomicrobiellum agilis Mies et al., 2024
Effective publication
Mies et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:tm1bm3q2 (validated)
Canonical URL
https://seqco.de/i:32911

Nomenclature

Rank
Species
Syllabication
a'gi.lis
Etymology
L. gen. n. agilis, of Trichonympha agilis, referring to the host species.
Nomenclatural type
NCBI Assembly: GCA_020328155.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The species comprises only metagenome-assembled genomes and single-cell amplified genomes. The species includes all bacteria with more than 95% average nucleotide identity (ANI) to the type genome. The GC content of the type genome is 36.0 mol% and the estimated genome size is 1.3 Mbp.
Classification
Bacteria » Elusimicrobiota » Endomicrobiia » Endomicrobiales » Endomicrobiaceae » Endomicrobiellum » Endomicrobiellum agilis
Parent
Endomicrobiellum

Genomics

Accession
NCBI Assembly:GCA_020328155.1
Type
Single-Cell Amplified Genome (SAG)
Estimated Quality Metrics
  • Completeness: 96.63%
  • Contamination: 0.0%
  • Quality: 96.63
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 66.0%)
  • 1 23S rRNA (up to 27.0%)
  • tRNAs for 19 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 36.3%
  • Coding Density: 77.12%
  • Codon Table: 11
  • N50: 86,172 bp
  • Contigs: 23
  • Largest Contig: 239,284 bp
  • Assembly Length: 1,285,918 bp
  • Ambiguous Assembly Fraction: 0.0064%
Automated checks
Complete
See additional details
Last modified 4 days ago

Metadata

Outside links and data sources
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Local history
Registered by
Mies, Undine Sophie about 1 year ago
Submitted by
Mies, Undine Sophie 6 months ago
Curators
Validated by
Rodriguez-R, Luis M 6 months ago
Date of priority
2024-05-29 02:02 PM (UTC)

Publications
1

Citation Title
Mies et al., 2024, mBio Genome reduction and horizontal gene transfer in the evolution of Endomicrobia—rise and fall of an intracellular symbiosis with termite gut flagellates
Effective publication


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