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Gammaporibacter thiotrophicusTs

Citation

Formal styling
Gammaporibacter thiotrophicusTs Zhang et al., 2024 (priority 2026)
Effective publication
Zhang et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:mrprpwka (validated)
Canonical URL
https://seqco.de/i:33267

Nomenclature

Rank
Species
Syllabication
thi.o.tro'phi.cus
Etymology
Gr. neut. n. theion, meaning sulfur; Gr. masc. adj. trophikos, nursing, tending or feeding; N.L. masc. adj. thiotrophicus, feeding on sulfur
Nomenclatural type
NCBI Assembly: GCA_028817305.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
A bacterium from a sponge that can live with sulfur as an energy source
Classification
Bacteria » Pseudomonadota » Gammaproteobacteria » “Gammaporibacterales” » “Gammaporibacteraceae” » Gammaporibacter » Gammaporibacter thiotrophicusTs
Parent
Gammaporibacter

Genomics

Accession
NCBI Assembly:GCA_028817305.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 93.4%
  • Contamination: 0.9%
  • Quality: 88.9
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 19 amino acids
Sequencing depth
20.0 ×
Source
Other features
  • G+C Content: 64.48%
  • Coding Density: 89.22%
  • Codon Table: 11
  • N50: 13,203 bp
  • Contigs: 199
  • Largest Contig: 66,551 bp
  • Assembly Length: 2,023,887 bp
  • Ambiguous Assembly Fraction: 0.12%
Automated checks
Complete
See additional details
Last modified 2 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 2 years ago by Thomas, Torsten
Submitted
2 months ago by Thomas, Torsten
Curators
Endorsed
Over 2 years ago by Rodriguez-R, Luis M
Validated
15 days ago by St. John, Emily
Date of priority
2026-03-16 09:39 AM (UTC)

Publications
1

Citation Title
Zhang et al., 2024, Nature Communications Genome-scale metabolic modelling reveals interactions and key roles of symbiont clades in a sponge holobiont
Effective publication


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seqco.de/r:mrprpwka