Aceula lacicolaTs


Citation

Formal styling
Aceula lacicolaTs Williams et al., 2021 (valid 2024)
Effective publication
Williams et al., 2021
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:2rggbgyb (validated)
Canonical URL
https://seqco.de/i:33276

Nomenclature

Rank
Species
Syllabication
la.ci'co.la
Etymology
L. masc. n. lacus, lake; L. n. suff. -cola, from incola the inhabitant; N.L. fem. n. lacicola, lake-dweller
Nomenclatural type
NCBI Assembly: GCA_030765785.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
This species is the type for the genus Aceula. The description for this species is derived from Williams et al., 2021, and supplemented with additional information. Genome predictions designate this species as heterotrophic and capable of the fermentation of glucose to acetyl-CoA through EMP pathway. A reversible acetyl-CoA synthetase may be indicative of acetogenesis in this species. Proteases and peptidases for the degradation of proteins to amino acids is also encoded within the genome. Additionally, simple sugar transport and glycoside hydrolases are encoded by the genome and genes required for the synthesis of trehalose and glycogen is also present (Williams et al., 2021). The genome representative of this species encodes a V-type ATPase, respiratory F-type ATPase and Rnf complex for ATP synthesis, and a Group 3d [NiFe] hydrogenase (Williams et al., 2021). All genes required for the tight-adherence complex and the production of a Type-4a pilus is present in the genome of this species, as well as genes coding for a conductive pilin. The nomenclatural type for the species is the genome designated 3300035698_1100.
Classification
Bacteria » Omnitrophota » “Velamenicoccia” » “Zapsychrales” » “Aceulaceae” » Aceula » Aceula lacicolaTs
Parent
Aceula gtdb

Genomics

Accession
NCBI Assembly:GCA_030765785.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.07%
  • Contamination: 2.9%
  • Quality: 81.57
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 0 23S rRNAs
  • tRNAs for 20 amino acids
Sequencing depth
430.0 ×
Source
Other features
  • G+C Content: 37.2%
  • Coding Density: 93.53%
  • Codon Table: 11
  • N50: 46,173 bp
  • Contigs: 56
  • Largest Contig: 96,469 bp
  • Assembly Length: 1,505,651 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
IMG Annotation pipeline
CheckM1 from Williams et al 2021,  doi 10.3389/fmicb.2021.741077
CheckM2 from Seymour et al 2023,  doi 10.1038/s41564-022-01319-1  
Automated checks
Complete
See additional details

Last modified about 1 month ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Allen, Michelle about 1 year ago
Submitted by
Allen, Michelle 4 months ago
Curators
Validated by
Palmer, Marike 2 months ago
Date of priority
2024-09-04 06:09 AM (UTC)

Publications
1

Citation Title
Williams et al., 2021, Frontiers in Microbiology Shedding Light on Microbial “Dark Matter”: Insights Into Novel Cloacimonadota and Omnitrophota From an Antarctic Lake
Effective publication



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