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“Smithella cisternae”

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Citation

Formal styling
“Smithella cisternae” Qin et al., 2017
Effective publication
Qin et al., 2017
SeqCode status
Automated discovery
Canonical URL
https://seqco.de/i:364

Nomenclature

Rank
Species
Etymology
cisternae
Nomenclatural type
Genome sc|0006956 Ts

Taxonomy

Classification
Bacteria » Desulfobacterota » Syntrophia » Syntrophales » Smithellaceae » Smithella » “Smithella cisternae”
Parent
Smithella

Genomics

Accession
NCBI Assembly: GCA_001683985.1 [NCBI | EMBL]
Type
Enrichment Genome
Estimated Quality Metrics
  • Completeness: 98.1%
  • Contamination: 1.9%
  • Quality: 88.6
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Source
Other features
  • G+C Content: 42.79%
  • Coding Density: 85.58%
  • Codon Table: 11
  • N50: 35,699 bp
  • Contigs: 236
  • Largest Contig: 111,138 bp
  • Assembly Length: 2,753,163 bp
  • Ambiguous Assembly Fraction: 0.11%
Automated checks
Complete
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Last modified 4 days ago

Metadata

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Local history
Registered
Over 7 years ago by Excubia bot

Publications
1

Citation Title
Qin et al., 2017, Microbes and environments. Microbes and Environments Metagenomic Characterization of Candidatus Smithella cisternae Strain M82_1, a Syntrophic Alkane-Degrading Bacteria, Enriched from the Shengli Oil Field
Effective publication


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