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“Amulumruptor caecigallinarius”

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Citation

Formal styling
“Amulumruptor caecigallinarius” Hinsu et al., 2019
Effective publication
Hinsu et al., 2019
SeqCode status
Automated discovery
Canonical URL
https://seqco.de/i:41812

Nomenclature

Rank
Species
Etymology
caecigallinarius
Nomenclatural type
Genome sc|0006292 Ts

Taxonomy

Description
Hinsu et al. (2019): The bacterium belongs to a novel genus within the Muribaculaceae family. We propose the name Candidatus Amulumruptor caecigallinarius (L. amulum: starch; ruptor: breaker; amulumruptor: starch-breaker; caeca: caecum; gallinarius: of a poultry; caecigallinarius: from the caecum of poultry) for this genome. The name is assigned based on the predicted ability of the organism to digest starch. It is represented by a composite genome (GenBank acc. no. PXWE01000000) obtained from the metagenome of caecum of chicken.
Classification
Bacteria » Bacteroidota » Bacteroidia » Bacteroidales » Muribaculaceae » “Amulumruptor” » “Amulumruptor caecigallinarius”
Parent
“Amulumruptor” gtdb

Genomics

Accession
NCBI Assembly: GCA_004115465.1 [NCBI | EMBL]
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 94.3%
  • Contamination: 1.9%
  • Quality: 84.8
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 76.0%)
  • 1 23S rRNA (up to 34.0%)
  • tRNAs for 20 amino acids
Sequencing depth
44.0 ×
Source
Other features
  • G+C Content: 51.86%
  • Coding Density: 89.62%
  • Codon Table: 11
  • N50: 41,191 bp
  • Contigs: 157
  • Largest Contig: 107,566 bp
  • Assembly Length: 2,377,265 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details
Last modified 14 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 2 years ago and claimed 14 days ago by Nguyen, Huong

Publications
1

Citation Title
Hinsu et al., 2019, Meta Gene Genome reconstruction of a novel carbohydrate digesting bacterium from the chicken caecal microflora
Effective publication


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