Velthaea versatilis^Ts

Citation

Formal styling

Velthaea versatilis^Ts Ji et al., 2021 (valid 2024)

Effective publication

Ji et al., 2021

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:tgimo_87 (validated)

Canonical URL

https://seqco.de/i:43526

Nomenclature

Rank

Species

Syllabication

ver.sa'ti.lis

Etymology

L. fem. adj. versatilis, versatile, in reference to metabolic versatility

Nomenclatural type

NCBI Assembly: GCA_003134035.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Heterotroph and autotroph. Hydrogenotrophic chemolithoautotrophy using Group 1h [NiFe] hydrogenase and CBB cycle; capable of using atmospheric H2. Photoautotrophy; carboxysomes; photoreceptors. CO oxidation. Anaerobic respiration: sulfoxides. Assimilatory nitrate reduction. Organic substrates include peptides, amino acids, carboxylates, glycerol, taurine, urea, cyanate, sarcosine, alcohols (including methanol, ethanol), poly- and oligosaccharides, sugars, catechol, propane. PHA storage; glycogen storage. Motile by flagella (including phototaxis). Polyphosphate storage. Bidirectional [NiFe] hydrogenase (Group 3b). Also defined based on ANI, and phylogenies of 16S rRNA gene, 15 ribosomal proteins, and the GTDB.

Classification

Bacteria » Eremiobacterota » Eremiobacteria » “Baltobacterales” » “Baltobacteraceae” » Velthaea » Velthaea versatilis^Ts

Parent

Velthaea gtdb

Genomics

Accession

NCBI Assembly:GCA_003134035.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 92.58%
• Contamination: 1.54%
• Quality: 84.88

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 20 amino acids

Sequencing depth

15.0 ×

Source

• BioSample: SAMN08179377
• BioSample: SAMN07124969

Other features

• G+C Content: 65.0%
• Coding Density: 87.88%
• Codon Table: 11
• N50: 27,761 bp
• Contigs: 276
• Largest Contig: 89,191 bp
• Assembly Length: 4,743,460 bp
• Ambiguous Assembly Fraction: 0.031%

Submitter comments

Completeness estimated with CheckM

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_003134035.1
• GTDB Tree: s__Velthaea versatilis
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Velthaea versatilis (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 11 days ago
• Submission process status
• Quality checks before valid publication

Registered by

Ferrari, Belinda 3 months ago

Submitted by

Ferrari, Belinda 2 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Palmer, Marike 11 days ago

Date of priority

2024-10-17 12:47 AM (UTC)