Cybelea tumulisoli

Citation

Formal styling

Cybelea tumulisoli Ji et al., 2021 (valid 2024)

Effective publication

Ji et al., 2021

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:tgimo_87 (validated)

Canonical URL

https://seqco.de/i:43786

Nomenclature

Rank

Species

Syllabication

tu.mu.li.so'li

Etymology

L. masc. n. tumulus, mound, hill; L. neut. n. solum, soil; N.L. gen. n. tumulisoli, from the mound soil, in reference to palsa

Nomenclatural type

NCBI Assembly: GCA_003167155.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Obligate heterotroph. Organic substrates include peptides, amino acids, carboxylates, taurine, urea, sarcosine, PVA, arylsulfates, poly- and oligosaccharides, sugars, fluoroacetate. Degradation of β-glucan (GH1), xylan (GH10), chitin (GH18), and xyloglucan (GH74). PHA storage. Polyphosphate storage. Also defined based on ANI, and phylogenies of 16S rRNA gene, 15 ribosomal proteins, and the GTDB.

Classification

Bacteria » Eremiobacterota » Eremiobacteria » “Baltobacterales” » “Baltobacteraceae” » Cybelea » Cybelea tumulisoli

Parent

Cybelea gtdb

Genomics

Accession

NCBI Assembly:GCA_003167155.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 91.65%
• Contamination: 0.7%
• Quality: 88.15

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 20 amino acids

Sequencing depth

15.0 ×

Source

• BioSample: SAMN08178930
• BioSample: SAMN07124913

Other features

• G+C Content: 61.5%
• Coding Density: 91.14%
• Codon Table: 11
• N50: 32,021 bp
• Contigs: 201
• Largest Contig: 119,004 bp
• Assembly Length: 3,725,121 bp
• Ambiguous Assembly Fraction: 0.032%

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_003167155.1
• GTDB Tree: s__Cybelea tumulisoli
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Cybelea tumulisoli (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 11 days ago
• Submission process status
• Quality checks before valid publication

Registered by

Ferrari, Belinda 3 months ago

Submitted by

Ferrari, Belinda 2 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Palmer, Marike 11 days ago

Date of priority

2024-10-17 12:47 AM (UTC)