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Amarolinea dominans

Citation

Formal styling
Amarolinea dominans Petriglieri et al., 2023 (priority 2024)
Effective publication
Petriglieri et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:82uy5hy3 (validated)
Canonical URL
https://seqco.de/i:44002

Nomenclature

Rank
Species
Syllabication
do'mi.nans
Etymology
L. part. adj. dominans, indicating the high abundance in sewage sludge
Nomenclatural type
NCBI Assembly: GCA_016719785.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
A species of filamentous bacteria abundant in activated sludge globally. 
Classification
Bacteria » Chloroflexota » Anaerolineae » “Amarolineales” » Amarolineaceae » Amarolinea » Amarolinea dominans
Parent
Amarolinea gtdb assigned in Andersen et al., 2019

Genomics

Accession
NCBI Assembly:GCA_016719785.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.73%
  • Contamination: 0.64%
  • Quality: 89.53
Ribosomal and transfer RNA genes
  • 2 16S rRNAs (up to 100.0%)
  • 2 23S rRNAs (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
16.0 ×
Source
Other features
  • G+C Content: 62.59%
  • Coding Density: 87.62%
  • Codon Table: 11
  • N50: 337,034 bp
  • Contigs: 35
  • Largest Contig: 775,720 bp
  • Assembly Length: 6,591,815 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details
Last modified about 1 year ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Almost 2 years ago by Petriglieri, Francesca
Submitted
Over 1 year ago by Petriglieri, Francesca
Curators
Validated
Over 1 year ago by Rodriguez-R, Luis M
Date of priority
2024-04-26 11:27 AM (UTC)

Publications
2

Citation Title
Petriglieri et al., 2023, mSystems A comprehensive overview of the Chloroflexota community in wastewater treatment plants worldwide
Effective publication
Andersen et al., 2019, Systematic and Applied Microbiology Genomic insights into Candidatus Amarolinea aalborgensis gen. nov., sp. nov., associated with settleability problems in wastewater treatment plants
Assigned this taxon


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seqco.de/r:82uy5hy3