Lucifugimonas marina^Ts

Citation

Formal styling

Lucifugimonas marina^Ts Lim et al., 2023 (valid 2024)

Effective publication

Lim et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:tq6vmkw1 (validated)

Canonical URL

https://seqco.de/i:44169

Nomenclature

Rank

Species

Syllabication

ma.ri'na

Etymology

L. fem. adj. marina, marine, of the sea

Nomenclatural type

INSDC Nucleotide: CP046146.1

Reference strain

JH545

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Aerobic, oligotrophic, and chemoheterotrophic. Gram-negative with a monoderm envelope. Cells are non-motile and dimorphic with short rods of ~0.8 × 0.4 µm and cocci of ~0.5 µm diameter. Do not form colonies on solid agar plates. Grows very slowly and reaches stationary phase at ~50 days of growth in artificial seawater medium. Light inhibits cellular growth.

Classification

Bacteria » Chloroflexota » Dehalococcoidia » Lucifugimonadales » Lucifugimonadaceae » Lucifugimonas » Lucifugimonas marina^Ts

Parent

Lucifugimonas assigned in Lim et al., 2023

Genomics

Accession

INSDC Nucleotide:CP046146.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 99.01%
• Contamination: 0.0%
• Quality: 99.01

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 21 amino acids

Sequencing depth

188.65 ×

Source

• BioSample: SAMN13314701

Other features

• G+C Content: 51.8%
• Coding Density: 87.4%
• Codon Table: 11
• N50: 3,091,874 bp
• Contigs: 1
• Largest Contig: 3,091,874 bp
• Assembly Length: 3,091,874 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

Metadata

Outside links and data sources

• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Lucifugimonas marina (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 4 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Lim, Yeonjung 6 months ago

Submitted by

Lim, Yeonjung 5 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)
• Valero Tebar, Juan

Validated by

Rodriguez-R, Luis M 4 months ago

Date of priority

2024-06-12 05:21 AM (UTC)