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Lucifugimonas marinaTs

Citation

Formal styling
Lucifugimonas marinaTs Lim et al., 2023 (priority 2024)
Effective publication
Lim et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:tq6vmkw1 (validated)
Canonical URL
https://seqco.de/i:44169

Nomenclature

Rank
Species
Syllabication
ma.ri'na
Etymology
L. fem. adj. marina, marine, of the sea
Nomenclatural type
INSDC Nucleotide: CP046146.1
Reference strain
Strain sc|0038738: JH545 Lookup StrainInfo
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Aerobic, oligotrophic, and chemoheterotrophic. Gram-negative with a monoderm envelope. Cells are non-motile and dimorphic with short rods of ~0.8 × 0.4 µm and cocci of ~0.5 µm diameter. Do not form colonies on solid agar plates. Grows very slowly and reaches stationary phase at ~50 days of growth in artificial seawater medium. Light inhibits cellular growth.
Classification
Bacteria » Chloroflexota » Dehalococcoidia » Lucifugimonadales » Lucifugimonadaceae » Lucifugimonas » Lucifugimonas marinaTs
Parent
Lucifugimonas gtdb assigned in Lim et al., 2023

Genomics

Accession
INSDC Nucleotide:CP046146.1
Cultures
Strain sc|0038738
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 99.01%
  • Contamination: 0.0%
  • Quality: 99.01
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
188.65 ×
Source
Other features
  • G+C Content: 51.8%
  • Coding Density: 87.4%
  • Codon Table: 11
  • N50: 3,091,874 bp
  • Contigs: 1
  • Largest Contig: 3,091,874 bp
  • Assembly Length: 3,091,874 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details
Last modified 6 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 1 year ago by Lim, Yeonjung
Submitted
Over 1 year ago by Lim, Yeonjung
Curators
Validated
Over 1 year ago by Rodriguez-R, Luis M
Date of priority
2024-06-12 05:21 AM (UTC)

Publications
1

Citation Title
Lim et al., 2023, Nature Communications Cultivation of marine bacteria of the SAR202 clade
Effective publication
Assigned this taxon


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seqco.de/r:tq6vmkw1