JSONPDF

“Aquarickettsia rohweri”

This name was automatically created through literature mining, and it currently has no standing or validity.
Authors of original publications are encouraged to claim the name and submit it for validation
Login or Signup to claim this name.

Citation

Formal styling
“Aquarickettsia rohweri” Klinges et al., 2019
Effective publication
Klinges et al., 2019
SeqCode status
Automated discovery
Canonical URL
https://seqco.de/i:463

Nomenclature

Rank
Species
Syllabication
roh'we.ri
Etymology
N.L. gen. n. rohweri, named after Dr. Forest Rohwer, whose group first described this taxon in corals
Nomenclatural type
Genome sc|0006291 Ts

Taxonomy

Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » Rickettsiales » “Midichloriaceae” » “Aquarickettsia” » “Aquarickettsia rohweri”
Parent
“Aquarickettsia”

Genomics

Accession
NCBI Assembly: GCA_003953955.1 [NCBI | EMBL]
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.32%
  • Contamination: 2.86%
  • Quality: 81.02
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
305.0 ×
Source
Other features
  • G+C Content: 27.59%
  • Coding Density: 87.53%
  • Codon Table: 11
  • N50: 10,860 bp
  • Contigs: 155
  • Largest Contig: 35,498 bp
  • Assembly Length: 1,284,848 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination estimated with CheckM v1.2.5

Automated checks
Complete
See additional details
Last modified 10 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
About 7 years ago and claimed 10 days ago by Nguyen, Huong

Publications
5

Citation Title
Baker et al., 2022, The ISME Journal The coral symbiont Candidatus Aquarickettsia is variably abundant in threatened Caribbean acroporids and transmitted horizontally
Baker et al., 2021, The coral symbiontCandidatusAquarickettsia is variably abundant in threatened Caribbean acroporids and transmitted horizontally
Klinges et al., 2020, Environmental Microbiology Parasitic ‘ Candidatus Aquarickettsia rohweri’ is a marker of disease susceptibility in <scp> Acropora cervicornis </scp> but is lost during thermal stress
Klinges et al., 2020, The ISME Journal Correction: Phylogenetic, genomic, and biogeographic characterization of a novel and ubiquitous marine invertebrate-associated Rickettsiales parasite, Candidatus Aquarickettsia rohweri, gen. nov., sp. nov
Klinges et al., 2019, The ISME Journal Phylogenetic, genomic, and biogeographic characterization of a novel and ubiquitous marine invertebrate-associated Rickettsiales parasite, Candidatus Aquarickettsia rohweri, gen. nov., sp. nov
Effective publication


© 2022-2026 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license