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Phycocordibacter aenigmaticusTs

Citation

Formal styling
Phycocordibacter aenigmaticusTs Jonas et al., 2025
Effective publication
Jonas et al., 2025
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:ywe1blo2 (validated)
Canonical URL
https://seqco.de/i:49172

Nomenclature

Rank
Species
Syllabication
ae.nig.ma'ti.cus
Etymology
L. masc. adj. aenigmaticus, enigmatic or obscure
Nomenclatural type
NCBI Assembly: GCA_045401115.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
This is a Patescibacteria group bacterium that is a symbiont of the microalgae Nannochloropsis oceanica strain IMET1 and Tetradesmus obliquus strain HTB1. Both microalgae are grown with 10% CO2 in our laboratory for carbon mitigation research. This bacterium was found at the 1 L and 500 L scale and has a genome size of 721,362 bp.
Classification
Bacteria » Patescibacteriota » “Paceibacteria” » Phycocordibacterales » Phycocordibacteraceae » Phycocordibacter » Phycocordibacter aenigmaticusTs
Parent
Phycocordibacter

Genomics

Accession
NCBI Assembly:GCA_045401115.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.45%
  • Contamination: 0.54%
  • Quality: 95.75
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 93.0%)
  • tRNAs for 19 amino acids
Sequencing depth
380.0 ×
Source
Other features
  • G+C Content: 44.05%
  • Coding Density: 88.98%
  • Codon Table: 11
  • N50: 721,362 bp
  • Contigs: 1
  • Largest Contig: 721,362 bp
  • Assembly Length: 721,362 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination was assessed with CheckM2. Taxonomic novelty and classification was based on outputs from GTDB, TGYS, and MiGA on AAI, dDDH, and RED scores.
Automated checks
Complete
See additional details
Last modified 12 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
About 1 year ago by Jonas, Lauren
Submitted
12 months ago by Jonas, Lauren
Curators
Endorsed
11 months ago by Palmer, Marike
Validated
3 months ago by Palmer, Marike
Date of priority
2025-06-17 05:37 PM (UTC)

Publications
1

Citation Title
Jonas et al., 2025, mBio Two novel Patescibacteria: Phycocordibacter aenigmaticus gen. nov. sp. nov. and Minusculum obligatum gen. nov. sp. nov., both associated with microalgae optimized for carbon dioxide sequestration from flue gas
Effective publication


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seqco.de/r:ywe1blo2