Mesorhizobium xinjiangense


Citation

Formal styling
Mesorhizobium xinjiangense Meng et al., 2022 (priority 2025)
Effective publication
Meng et al., 2022
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:g4_brxk9 (validated)
Canonical URL
https://seqco.de/i:49632 Copy

Nomenclature

Rank
Species
Syllabication
xin.jiang.en'se
Etymology
N.L. neut. adj. xinjiangense, referring to Xinjiang province in China, the area where the type strain was isolated
Nomenclatural type
NCBI Assembly: GCF_009749525.1
Reference strain
Strain sc|0038897: lm94 = KCTC 72863 = CCTCC AB2019377 Lookup StrainInfo
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Cells are Gram-stain-negative, aerobic, non-flagellated, non-gliding, rod-shaped, 0.3–0.5 µm in width, 0.4–1.0 µm in length. Colonies on LB are circular, convex, smooth, opaque, beige-pigmented and approximately 1.0–1.5 mm in diameter after 3 days at 37 °C. Growth occurs at 20–45 °C (optimum 37 °C), pH 6.0–9.5 (optimum pH 7.0–7.5), and in the presence of 0–6% (w/v) NaCl (optimum 0–1%). Cells are catalase-positive and oxidase-positive. They are negative for H2S production, citrate utilization, indole production, gelatinase production and starch hydrolysing but positive for arabinose, tryptophan deaminase and lysine decarboxylase according to API 20E tests. Acid is produced from d-arabinose, l-arabinose, d-ribose, d-xylose, d-adonitol, d-glucose, d-fructose, l-rhamnose, mannose, ESC, sorbitol, d-lyxose, d-fucose, l-fucose, d-arbaitol and 5-keto-potassium gluconate (API 50 CHB). In API ZYM tests, positive for alkaline phosphatase, esterase (C4), leucine arylamidase, valine arylamidase, trypsin, acid phosphatase and naphthol-AS-BI-phosphohydrolase activities. In carbon source oxidation tests, cells are positive for d-sorbitol, d-mannitol, d-arabitol, glycerol, d-fructose-6-PO4, N-acetyl-d-glucosamine, l-alanine, l-arginine, l-glutamic acid, l-histidine, α-d-glucose, d-mannose, d-fructose, l-fucose, d-fucose, l-rhamnose, d-serine, d-glucuronic acid, glucuronamide, l-lactic acid, d-malic acid and l-malic acid. Q-10 is the sole respiratory quinone. The major polar lipids are phosphatidylethanolamine (PE), phosphatidylglycerol (PG), unidentified phospholipid (PL), phosphatidylcholine (PC), diphosphatidylglycerol (DPG), unidentified aminolipid (AL), unknown glycolipid (GL), unidentified aminophospholipid (APL2) and unidentified polar lipid (L1 and L2). The major cellular fatty acids (> 10.0%) are C19:0 cyclo ω8c and Summed Feature 8 (C18:1 ω6c and/or C18:1 ω7c). The genomic DNA G+C content of the type strain is 63.6 mol%.
Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » Hyphomicrobiales » Phyllobacteriaceae » Mesorhizobium » Mesorhizobium xinjiangense
Parent
Mesorhizobium ncbi

Genomics

Accession
NCBI Assembly:GCF_009749525.1
Cultures
Strain sc|0038897
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 99.1%
  • Contamination: 2.8%
  • Quality: 85.1
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
561.0 ×
Source
Other features
  • G+C Content: 63.6%
  • Coding Density: 88.39%
  • Codon Table: 11
  • N50: 177,626 bp
  • Contigs: 53
  • Largest Contig: 447,155 bp
  • Assembly Length: 5,256,375 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Last modified about 1 month ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Van Lill, Melandre, created 5 months ago and claimed about 1 month ago
Submitted by
Van Lill, Melandre about 1 month ago
Curators
Validated by
Rodriguez-R, Luis M 19 days ago
Date of priority
2025-03-20 05:10 AM (UTC)

Publications
1

Citation Title
Meng et al., 2022, Archives of Microbiology Mesorhizobium xinjiangense sp. nov., isolated from rhizosphere soil of Alhagi sparsifolia
Effective publication



© 2022-2025 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license