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Magnetominusculus linsii

Citation

Formal styling
Magnetominusculus linsii Uzun et al., 2022 (valid 2025)
Effective publication
Uzun et al., 2022
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:rqwc4ia3 (validated)
Canonical URL
https://seqco.de/i:49918

Nomenclature

Rank
Species
Syllabication
lin'si.i.
Etymology
N.L. gen. masc. n. linsii, of Lins, named after Ulysses Lins, a Brazilian microbiologist, who made a significant contribution to the study of magnetotactic bacteria
Nomenclatural type
NCBI Assembly: GCA_022321325.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Small ovoid cells 1.5 μm long and 1.2 μm wide, form two bundles of bullet-shaped magnetite magnetosomes. Potentially capable of chemolithoautotrophy with the oxidation of sulfur compounds and carbon assimilation by Wood–Ljungdahl pathway. Potentially capable of heterotrophy by glycolysis. Not capable of nitrogen fixation. The reference strain is LBB02. The genome reference sequence of LBB02 is JAKOEO000000000. G+C content 47.0%.
Classification
Bacteria » Nitrospirota » Thermodesulfovibrionia » Thermodesulfovibrionales » Magnetobacteriaceae » Magnetominusculus » Magnetominusculus linsii
Parent
Magnetominusculus assigned in Lin et al., 2017

Genomics

Accession
NCBI Assembly:GCA_022321325.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 91.52%
  • Contamination: 0.0%
  • Quality: 91.52
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 19 amino acids
Sequencing depth
177.7 ×
Source
Other features
  • G+C Content: 47.5%
  • Coding Density: 91.13%
  • Codon Table: 11
  • N50: 44,214 bp
  • Contigs: 142
  • Largest Contig: 137,133 bp
  • Assembly Length: 3,471,208 bp
  • Ambiguous Assembly Fraction: 1.11%
Submitter comments
The quality metrics were assessed using the QUAST v5.0.2. The genome coverages were evaluated by QualiMap 2 v2.2.29 and Bowtie 2 v2.3.2. Genome completeness and contamination were estimated using CheckM v1.1.3 
Automated checks
Complete
See additional details
Last modified 1 day ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Denis, Grouzdev, created 6 days ago
Submitted by
Denis, Grouzdev 6 days ago
Curators
Validated by
Rodriguez-R, Luis M 1 day ago
Date of priority
2025-04-07 03:05 PM (UTC)

Publications
2

Citation Title
Uzun et al., 2022, Frontiers in Microbiology Detection of interphylum transfers of the magnetosome gene cluster in magnetotactic bacteria
Effective publication
Lin et al., 2017, Proceedings of the National Academy of Sciences Origin of microbial biomineralization and magnetotaxis during the Archean
Assigned this taxon


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