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Fimbriimonas antarctica

Citation

Formal styling
Fimbriimonas antarctica Tan et al., 2026
Effective publication
Tan et al., 2026
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:_7w3mg8c (validated)
Canonical URL
https://seqco.de/i:51191

Nomenclature

Rank
Species
Syllabication
an.tarc'ti.ca
Etymology
L. fem. adj. antarctica, southern, pertaining to Antarctica
Nomenclatural type
NCBI Assembly: GCA_965610675.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The type material is the metagenome assembled genome BH-11_ARM2 recovered from soil from Bunger Hills, East Antarctica. The MAG consists of 4.0 Mbp in 138 contigs with an estimated completeness of 98.05% and 0.03% contamination, 16S (1507 bp), partial 23S (1480 bp), and 5S (117 bp) genes, and 47 tRNAs (22 unique: 20 standard plus tRNA-fMet and tRNA-SeC). The GC content of this MAG is 62.1%.
Classification
Bacteria » Armatimonadota » Fimbriimonadia » Fimbriimonadales » Fimbriimonadaceae » Fimbriimonas » Fimbriimonas antarctica
Parent
Fimbriimonas

Genomics

Accession
NCBI Assembly:GCA_965610675.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.05%
  • Contamination: 0.03%
  • Quality: 97.9
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 2 23S rRNAs (up to 45.0%)
  • tRNAs for 21 amino acids
Sequencing depth
15.2 ×
Source
Other features
  • G+C Content: 62.1%
  • Coding Density: 89.83%
  • Codon Table: 11
  • N50: 46,985 bp
  • Contigs: 138
  • Largest Contig: 134,203 bp
  • Assembly Length: 4,020,907 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness estimates calculated with CheckM2 (v1.0.1). rRNA genes obtained with barrnap (v0.9) and Infernal (v1.1.4) with Rfam (v14.10). tRNAs detected with tRNAscan-SE (v2.0.12).
Automated checks
Complete
See additional details
Last modified about 1 month ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
10 months ago and claimed 10 months ago by Vázquez-Campos, Xabier
Submitted
10 months ago by Vázquez-Campos, Xabier
Curators
Endorsed
7 months ago by Palmer, Marike
Validated
4 days ago by Palmer, Marike
Date of priority
2026-02-23 11:19 PM (UTC)

Publications
1

Citation Title
Tan et al., 2026, Communications Earth & Environment Persistent petroleum pollution shifts soil microbial responses in Bunger Hills, East Antarctica
Effective publication


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