JSONPDF

Ilskoviplasma glebicumTs

Citation

Formal styling
Ilskoviplasma glebicumTs Sereika et al., 2025
Effective publication
Sereika et al., 2025
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:kohim6k6 (validated)
Canonical URL
https://seqco.de/i:53395

Nomenclature

Rank
Species
Syllabication
gle.bi'cum
Etymology
L. fem. n. gleba, clod or lump of earth; L. neut. adj. suff. -icum, suffix used with the sense of belonging to; N.L. neut. adj. glebicum, Pertinent to lumps of earth, referring to a species found in soil
Nomenclatural type
NCBI Assembly: GCA_963773985.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Species established on the basis of ANI comparisons to GTDB R226 and 16S rRNA classifications to Silva 138.2.
Classification
Archaea » “Micrarchaeota” » “Micrarchaeia” » “Micrarchaeales” » “Micrarchaeaceae” » Ilskoviplasma » Ilskoviplasma glebicumTs
Parent
Ilskoviplasma

Genomics

Accession
NCBI Assembly:GCA_963773985.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.73%
  • Contamination: 1.21%
  • Quality: 86.68
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
24.5 ×
Source
Other features
  • G+C Content: 45.41%
  • Coding Density: 90.77%
  • Codon Table: 11
  • N50: 624,111 bp
  • Contigs: 3
  • Largest Contig: 624,111 bp
  • Assembly Length: 922,126 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination estimates are by CheckM2
Automated checks
Complete
See additional details
Last modified 9 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
10 months ago and claimed 10 months ago by Sereika, Mantas
Submitted
9 months ago by Sereika, Mantas
Curators
Validated
15 days ago by Palmer, Marike
Date of priority
2025-10-06 05:40 AM (UTC)

Publications
1

Citation Title
Sereika et al., 2025, Nature Microbiology Genome-resolved long-read sequencing expands known microbial diversity across terrestrial habitats
Effective publication


© 2022-2026 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license
seqco.de/r:kohim6k6