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Nitrososappho danicaTs

Citation

Formal styling
Nitrososappho danicaTs Singleton et al., 2025
Effective publication
Singleton et al., 2025
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:xueh5m88 (validated)
Canonical URL
https://seqco.de/i:54884

Nomenclature

Rank
Species
Syllabication
da.ni'ca
Etymology
N.L. fem. adj. danica, Danish, referring to the origin of the sample and wide distribution in Denmark
Nomenclatural type
Genome sc|0005407 Ts
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Species established on the basis of ANI comparisons to GTDB R226. The type genome was recovered from urban sediment of a rainwater basin. Based on metabolic reconstruction, Nitrososappho danica is aerobic, capable of ammonia oxidation, and encodes genes for urea use. 
Classification
Archaea » Thermoproteota » Nitrososphaeria » Nitrososphaerales » Nitrososphaeraceae » Nitrososappho » Nitrososappho danicaTs
Parent
Nitrososappho

Genomics

Accession
NCBI Assembly: GCA_974504955.1 [NCBI | EMBL]
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 91.7%
  • Contamination: 0.29%
  • Quality: 90.25
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
46.1 ×
Source
Other features
  • G+C Content: 38.0%
  • Coding Density: 74.58%
  • Codon Table: 11
  • N50: 342,656 bp
  • Contigs: 8
  • Largest Contig: 521,256 bp
  • Assembly Length: 2,212,647 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination estimates are by CheckM2
Automated checks
Complete
See additional details
Last modified 8 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
10 months ago by Sereika, Mantas
Submitted
10 months ago by Sereika, Mantas
Curators
Validated
8 months ago by St. John, Emily
Date of priority
2025-12-04 09:55 AM (UTC)

Publications
1

Citation Title
Singleton et al., 2025, Nature The Microflora Danica atlas of Danish environmental microbiomes
Effective publication


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