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Anoxypelagibacter denitrificansTs

Citation

Formal styling
Anoxypelagibacter denitrificansTs corrig. Ruiz-Perez et al., 2021 (priority 2025)
Effective publication
Ruiz-Perez et al., 2021
Corrigendum
Oren, 2022 from “Anoxipelagibacter denitrificans” (sic)
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:jh3r30a6 (validated)
Canonical URL
https://seqco.de/i:592

Nomenclature

Rank
Species
Syllabication
de.ni.tri.fi'cans
Etymology
N.L. masc. part. adj. denitrificans, denitrifying
Nomenclatural type
NCBI Assembly: GCA_017640265.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Anoxypelagibacter denitrificans, named because of its capacity to use nitrate as an electron acceptor, which is a trait not present in its closest named surface relative Pelagibacter ubiqueversans. In general, A. denitrificans exhibits small rod-shaped cells of approximately 1 × 0.2 m. The genome size is predicted to be approximately 1.2 Mbp with a G + C% content of approximately 30%. The designated type material is MAG_ENTP2013_S02_SV82_300m_MAG_01 and its genome sequence can be found under NCBI BioSample accession number SAMN15305928.
Classification
Bacteria » Pseudomonadota » Alphaproteobacteria » Pelagibacterales » Pelagibacteraceae » Anoxypelagibacter » Anoxypelagibacter denitrificansTs
Parent
Anoxypelagibacter
Pseudonyms
  • Anoxipelagibacter denitrificans (Original, corrected name)

Genomics

Accession
NCBI Assembly:GCA_017640265.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 90.9%
  • Contamination: 3.61%
  • Quality: 72.85
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 14 amino acids
Sequencing depth
62.0 ×
Source
Other features
  • G+C Content: 31.17%
  • Coding Density: 95.17%
  • Codon Table: 11
  • N50: 15,926 bp
  • Contigs: 101
  • Largest Contig: 59,147 bp
  • Assembly Length: 918,736 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details
Last modified 3 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 4 years ago and claimed 4 months ago by Tsementzi, Despina
Submitted
3 months ago by Tsementzi, Despina
Curators
Validated
3 months ago by St. John, Emily
Date of priority
2025-09-03 09:24 PM (UTC)

Publications
2

Citation Title
Oren, 2022, International Journal of Systematic and Evolutionary Microbiology Candidatus List No. 4: Lists of names of prokaryotic Candidatus taxa
Corrigendum
Ruiz-Perez et al., 2021, Systematic and Applied Microbiology Description of Candidatus Mesopelagibacter carboxydoxydans and Candidatus Anoxipelagibacter denitrificans: Nitrate-reducing SAR11 genera that dominate mesopelagic and anoxic marine zones
Effective publication


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seqco.de/r:jh3r30a6