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Droplet Digital PCR Assay for Detection and Quantification of ‘Candidatus Phytoplasma solani’ in Grapevine Samples

Citation
Landi et al. (2025). Biology 14 (9)
Names
Ca. Phytoplasma solani
Abstract
‘Candidatus Phytoplasma solani’ is the causal agent of the Bois noir (BN), affecting grapevine worldwide. The complex epidemiology of BN, which involves multiple ‘Ca. P. solani’ host plants and insect vectors, as well as the occurrence of recovery (loss of symptoms on grapevine canopy), makes disease investigations and containment in vineyards difficult. To achieve early detection of ‘Ca. P. solani’, a droplet digital PCR (ddPCR)-based approach and quantitative (q)PCR assay were compared, testin
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‘Candidatus Pseudomonas auctus’ sp. nov. JDE115 isolated from nodules on soybean (Glycines max)

Citation
Ali et al. (2025). PLOS One 20 (9)
Names
Ca. Pseudomonas auctus
Abstract
A Gram-negative, facultative anaerobic, rod-shaped, motile with peritrichous flagella, fluorescent bacterium, designated ‘Candidatus Pseudomonas auctus’ sp. nov. JDE115, was isolated from soybean root nodules in Virginia and characterized using a comprehensive integrative methodology. Growth of JDE115 occurred with 0–5.0% (w/v) NaCl (optimum 1%), at pH 6.0–10.0 (optimum pH 7.0), and at 10–40°C (optimum 28°C) in LB broth. Phylogenetic analyses based on the 16S rRNA gene placed the isolate as a me
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Aeroponic Propagation of Citrus Trees Infected with ‘Candidatus Liberibacter asiaticus’ v1

Citation
Scanlon et al. (2025).
Names
Ca. Liberibacter asiaticus
Abstract
This is a general protocol for the vegetative propagation of citrus material infected with the bacterium Candidatus Liberibacter asiaticus (CLas), the presumed causal agent of citrus greening disease (HLB), using an aeroponic cloning apparatus. The following procedure details a workflow using an EZ-Clone Pro Low Cloning System from Hydrobuilder.com. This system comes in varying cell-sizes (number of clones). We have found the most versatile to be the 16- or 32-cell size based on ease of preparat
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Tissue-specific endophytic microbiome responses to “Candidatus Liberibacter asiaticus” in two citrus cultivars

Citation
Zheng et al. (2025). Plant Disease
Names
Ca. Liberibacter asiaticus
Abstract
Citrus Huanglongbing (HLB), caused by “Candidatus Liberibacter asiaticus” (CLas), is a destructive disease threatening global citrus industry. Although citrus cultivars differ in HLB sensitivity, how infection alters endophytic bacterial communities in cultivars with contrasting susceptibility remains unclear. Here, we compared endophytic microbiome shifts in leaf and root tissue of HLB-susceptible Shatangju mandarin (C. reticulata cv. Shatangju) and HLB-tolerant Shatian pomelo (C. maxima cv. S
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First Report of ‘Candidatus Phytoplasma fraxini’-Related Strain Associated with Peach Yellows in Pennsylvania

Citation
Costanzo et al. (2025). Plant Disease
Names
Ca. Phytoplasma fraxini
Abstract
In the fall of 2015 and 2016, during annual disease surveys conducted by the Pennsylvania Department of Agriculture, seven peach trees (Prunus persica) from a commercial orchard in Berks County, PA, were observed exhibiting symptoms consistent with phytoplasma infection. Symptoms included premature leaf yellowing and reddening, foliar epinasty, shotholes and vein reddening. Seven out of 700 peach trees in the orchard displayed these symptoms and were ultimately removed. Leaf and stem samples we
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A Draft Genome Resource for ‘Candidatus Phytoplasma prunorum’, the Agent Associated with European Stone Fruit Yellows Disease

Citation
Fonseca et al. (2025). PhytoFrontiers™ 5 (3)
Names
Ca. Phytoplasma mali Ca. Phytoplasma prunorum
Abstract
‘ Candidatus Phytoplasma prunorum’ is associated with European stone fruit yellows disease, affecting wild and cultivated species of Prunus at different degrees of susceptibility, and so far is being mainly restricted to Europe. Here, we report draft genome sequences for ‘ Ca. Phytoplasma prunorum’ strains ESFY1 and LNS1, which represent the first available for this species. Strain ESFY1 is the causal agent of the European stone fruit yellows disease of P. persica in Germany, and LNS1 is the ca
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