Genome sc|0001007

Genomics

Accession

NCBI Assembly:GCA_032714615.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 98.3%
• Contamination: 1.3%
• Quality: 91.8

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

258.0 ×

Source

• BioSample: SAMN35453644

Other features

• G+C Content: 50.1%
• Coding Density: 86.23%
• Codon Table: 11
• N50: 201,956 bp
• Contigs: 26
• Largest Contig: 345,999 bp
• Assembly Length: 1,847,417 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

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Last modified about 1 month ago

Sample Metadata

BioSample entries

• BioSample: SAMN35453644

Date

Collection Date: 2011-10-01

Location

Lat Lon: 51.02836 N 13.47125 E

Toponym

Geo Loc Name: Germany

Environment

Env Broad Scale: terrestrial

Env Local Scale: digestive tract

Env Medium: gut content

Other

Host: Archispirostreptus gigas

Rel To Oxygen: anaerobe

Package

Ncbi Submission Package: MIGS.ba.host-associated.6.0

Biosamplemodel: MIGS/MIMS/MIMARKS.host-associated

All retrieved samples

• SAMN35453644: MIGS Cultured Bacterial/Archaeal sample from Methanocorpusculaceae archaeon

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Metadata retrieved about 1 month ago