JSON

Genome sc|0001009

Name

Methanorbis rubei

Database

NCBI Assembly

Accession

GCA_032714495.1

Genomics

Accession
NCBI Assembly:GCA_032714495.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 98.3%
  • Contamination: 1.3%
  • Quality: 91.8
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
253.0 ×
Source
Other features
  • G+C Content: 50.2%
  • Coding Density: 87.27%
  • Codon Table: 11
  • N50: 299,484 bp
  • Contigs: 15
  • Largest Contig: 371,544 bp
  • Assembly Length: 1,829,609 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2011-10-01
Location
Lat Lon: 51.02836 N 13.47125 E
Toponym
Geo Loc Name: Germany
Environment
Env Broad Scale: terrestrial
Env Local Scale: digestive tract
Env Medium: gut content
Other
Host: Centrobolus splendidus
Rel To Oxygen: anaerobe
Package
Ncbi Submission Package: MIGS.ba.host-associated.6.0
Biosamplemodel: MIGS/MIMS/MIMARKS.host-associated
All retrieved samples
Metadata retrieved 5 months ago


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