JSON

Genome sc|0001010

Name

Methanolapillus africanus

Database

NCBI Assembly

Accession

GCA_032714475.1

Genomics

Accession
NCBI Assembly:GCA_032714475.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 94.1%
  • Contamination: 0.7%
  • Quality: 90.6
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 75.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
115.0 ×
Source
Other features
  • G+C Content: 44.4%
  • Coding Density: 78.74%
  • Codon Table: 11
  • N50: 124,322 bp
  • Contigs: 34
  • Largest Contig: 367,644 bp
  • Assembly Length: 2,103,793 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified about 1 month ago

Sample Metadata

BioSample entries
Date
Collection Date: 2011-10-01
Location
Lat Lon: 51.02836 N 13.47125 E
Toponym
Geo Loc Name: Germany
Environment
Env Broad Scale: terrestrial
Env Local Scale: digestive tract
Env Medium: gut content
Other
Host: Archispirostreptus gigas
Rel To Oxygen: anaerobe
Package
Ncbi Submission Package: MIGS.ba.host-associated.6.0
Biosamplemodel: MIGS/MIMS/MIMARKS.host-associated
All retrieved samples
Metadata retrieved about 1 month ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license