Genome sc|0000102


Database

NCBI Assembly

Accession

GCA_947077715.1

Genomics

Accession
NCBI Assembly:GCA_947077715.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.0%
  • Contamination: 2.9%
  • Quality: 83.5
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
56.0 ×
Source
Other features
  • G+C Content: 65.53%
  • Coding Density: 85.43%
  • Codon Table: 11
  • N50: 20,253 bp
  • Contigs: 225
  • Largest Contig: 60,535 bp
  • Assembly Length: 3,090,338 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Script HMM.essential.rb from the Enveomics scripts collection using default paramentes was used for assess the completness and contamination of the MAG.
Automated checks
Complete

Last modified about 1 month ago

Sample Metadata

BioSample entries
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Ena Checklist: ERC000011
All retrieved samples

Metadata retrieved about 1 month ago

Sequencing Experiments

NextSeq 500 paired end sequencing


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