JSON

Genome sc|0001412

Name

“Aadella gelida”

Database

NCBI Assembly

Accession

GCA_030765205.1

Genomics

Accession
NCBI Assembly:GCA_030765205.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 93.52%
  • Contamination: 0.17%
  • Quality: 92.67
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 21 amino acids
Sequencing depth
70.0 ×
Source
Other features
  • G+C Content: 40.5%
  • Coding Density: 89.11%
  • Codon Table: 11
  • N50: 24,424 bp
  • Contigs: 113
  • Largest Contig: 69,385 bp
  • Assembly Length: 1,592,514 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
IMG Annotation pipeline
CheckM1 values as reported in 10.3389/fmicb.2021.741077
CheckM2 values as reported in 10.1038/s41564-022-01319-1
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2006-12/2015-01
Location
Lat Lon: 68.4725 S 78.188 E
Toponym
Geo Loc Name: Antarctica: Ace Lake
Environment
Sample Type: metagenomic assembly
Isolation Source: saline lake water
Env Broad Scale: aquatic biome [ENVO:00002030]
Env Local Scale: saline lake [ENVO:0000002019]
Env Medium: saline water [ENVO:00002010]
Other
Not detected
Package
Ncbi Submission Package: MIMAG.6.0
Biosamplemodel: MIMAG
Additional Accessions
SAMN06267208, SAMN06267209, SAMN06267210, SAMN06267211, SAMN06267212, SAMN06267213, SAMN06267214, SAMN06267215, SAMN06267216, SAMN06267217, SAMN06267218, SAMN06267219, SAMN06267220, SAMN06267221, SAMN06267222, SAMN06343953, SAMN06343954, SAMN06343955, SAMN09200903, SAMN09200904, SAMN09200905, SAMN09200906, SAMN09200907, SAMN09200908, SAMN09200909, SAMN09200910, SAMN09200911, SAMN09200912, SAMN09200914, SAMN09200915, SAMN09200916, SAMN09200917, SAMN09200918, SAMN09200919, SAMN09200920, SAMN09200921, SAMN09200922, SAMN09200923, SAMN09200924, SAMN09200925, SAMN09200939, SAMN09200940, SAMN09200941, SAMN09200942, SAMN09200943, SAMN09200944, SAMN09200945, SAMN09200946, SAMN09200947, SAMN09200948, SAMN09200949, SAMN09200962, SAMN09201091, SAMN09201092, SAMN09201093, SAMN09201094, SAMN09201095, SAMN09201096, SAMN09201097, SAMN09201098, SAMN09201099, SAMN09201100, SAMN09201101, SAMN09201102, SAMN09201103, SAMN09201406, SAMN09201407, SAMN09201408, SAMN09201409, SAMN09201412, SAMN09202328, SAMN09202352, SAMN09202353, SAMN09202354, SAMN09202355, SAMN09202356, SAMN09202357, SAMN09202358, SAMN09202359, SAMN09202360, SAMN09202361, SAMN09202384, SAMN09202385, SAMN09202386, SAMN09202387, SAMN09202388, SAMN09202389, SAMN09202390, SAMN09202391, SAMN09202392, SAMN09202393, SAMN09202415, SAMN09202416, SAMN09202417, SAMN09202418, SAMN09202419, SAMN09202420, SAMN09202421, SAMN09202422, SAMN09202423
All retrieved samples
Metadata retrieved 8 days ago


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