JSON

Genome sc|0001531

Name

“Fervidifonticultor tertius”

Database

NCBI Assembly

Accession

GCA_031459235.1

Genomics

Accession
NCBI Assembly:GCA_031459235.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 90.64%
  • Contamination: 0.19%
  • Quality: 89.69
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 1 23S rRNA (up to 37.0%)
  • tRNAs for 21 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 72.38%
  • Coding Density: 93.86%
  • Codon Table: 11
  • N50: 39,454 bp
  • Contigs: 109
  • Largest Contig: 123,866 bp
  • Assembly Length: 2,838,009 bp
  • Ambiguous Assembly Fraction: 0.00035%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2019-12
Location
Lat Lon: 24.95 N 98.44 E
Toponym
Geo Loc Name: China: Tengchong county, Yunnan, QQ • China: Tengchong, Yunnan
Environment
Sample Type: metagenomic assembly
Isolation Source: Hot spring sediment • QQ
Env Broad Scale: Hot spring
Env Local Scale: Hot spring sediment
Env Medium: Hot spring sediment
Other
Depth: Surface
Package
Ncbi Submission Package: MIMAG.sediment.6.0 • Metagenome.environmental.1.0
Biosamplemodel: MIMAG.sediment • Metagenome or environmental
All retrieved samples
Metadata retrieved about 2 months ago


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