Genome sc|0001568


Database

NCBI Assembly

Accession

GCA_963970155.1

Genomics

Accession
NCBI Assembly:GCA_963970155.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.12%
  • Contamination: 0.22%
  • Quality: 95.02
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 18 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 46.5%
  • Coding Density: 94.16%
  • Codon Table: 11
  • N50: 1,209,613 bp
  • Contigs: 1
  • Largest Contig: 1,209,613 bp
  • Assembly Length: 1,209,613 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Assembly with Flye, binning with MetaBAT2, and quality assessment with CheckM.
Automated checks
Complete

Last modified 10 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2019-11-13
Location
Geographic Location Latitude: 47.3
Geographic Location Longitude: 8.566667
Toponym
Geographic Location Country And Or Sea: Switzerland
Environment
Isolation Source: Lake Zurich
Environment Biome: freshwater lake
Environment Feature: fresh water
Broad Scale Environmental Context: freshwater ecosystem
Local Environmental Context: freshwater lake
Environmental Medium: freshwater lake biome
Other
Not detected
Package
Ena Checklist: ERC000047ERC000011
All retrieved samples

Metadata retrieved 10 months ago


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