JSON

Genome sc|0002354

Name

“Acidiparvus fluvialis”

Database

NCBI Assembly

Accession

GCA_041263285.1

Genomics

Accession
NCBI Assembly:GCA_041263285.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 94.48%
  • Contamination: 0.2%
  • Quality: 93.48
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 20 amino acids
Sequencing depth
41.0 ×
Source
Other features
  • G+C Content: 47.0%
  • Coding Density: 94.89%
  • Codon Table: 11
  • N50: 38,636 bp
  • Contigs: 54
  • Largest Contig: 126,076 bp
  • Assembly Length: 1,062,934 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 3 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2016-07-12
Location
Lat Lon: 29.8571 N 89.9778 W
Toponym
Geo Loc Name: USA: Louisiana
Environment
Isolation Source: river water
Gold Ecosystem Classification: Environmental | Aquatic | Freshwater | River | Unclassified
Other
Not detected
Package
Ncbi Submission Package: Metagenome.environmental.1.0
Biosamplemodel: Metagenome or environmental
All retrieved samples
Metadata retrieved 3 months ago


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