Genome sc|0003073

Genomics

Accession

NCBI Assembly:GCA_016464775.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 93.52%
• Contamination: 4.55%
• Quality: 70.77

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 21 amino acids

Sequencing depth

14.0 ×

Source

• BioSample: SAMN16445489
• BioSample: SAMN16703804

Other features

• G+C Content: 69.0%
• Coding Density: 89.97%
• Codon Table: 11
• N50: 94,063 bp
• Contigs: 76
• Largest Contig: 259,037 bp
• Assembly Length: 4,520,224 bp
• Ambiguous Assembly Fraction: 0.0024%

Submitter comments

Completeness estimated with CheckM2

Automated checks

Complete

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Last modified about 1 month ago

Sample Metadata

BioSample entries

• BioSample: SAMN16445489
• BioSample: SAMN16703804

Date

Collection Date: 2005

Location

Lat Lon: Not collected

Toponym

Geo Loc Name: Antarctica: Mitchell Peninsula

Environment

Sample Type: metagenomic assembly

Isolation Source: soil • Antarctic soil

Other

Not detected

Package

Ncbi Submission Package: Microbe.1.0 • Metagenome.environmental.1.0

Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental

All retrieved samples

• SAMN16445489: Microbe sample from Candidatus Dormiibacterota bacterium
• SAMN16703804: Metagenome or environmental sample from Antarctic Soil

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Metadata retrieved about 1 month ago