Genome sc|0003150


Database

NCBI Assembly

Accession

GCA_905200775.1

Genomics

Accession
NCBI Assembly:GCA_905200775.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.51%
  • Contamination: 0.0%
  • Quality: 95.51
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 95.14195584%)
  • 1 23S rRNA (up to 18.31683168%)
  • tRNAs for 17 amino acids
Source
Other features
  • G+C Content: 53.8%
  • Coding Density: 89.31%
  • Codon Table: 11
  • N50: 19,433 bp
  • Contigs: 143
  • Largest Contig: 51,087 bp
  • Assembly Length: 1,634,255 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination assessed with CheckM.
Automated checks
Complete

Last modified 9 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2008/2010
Location
Geographic Location Latitude: 55.676097
Geographic Location Longitude: 12.568337
Toponym
Geographic Location Country And Or Sea: Denmark
Environment
Isolation Source: human gut
Environment Biome: human-associated habitat • human gut
Environment Feature: human gut • human-associated habitat
Other
Not detected
Package
Ena Checklist: ERC000047ERC000015
Additional Accessions
ERS328761
All retrieved samples

Metadata retrieved 9 days ago

Sequencing Experiments

Illumina Genome Analyzer II paired end sequencing
Illumina Genome Analyzer II paired end sequencing


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