Genome sc|0003307


Database

NCBI Assembly

Accession

GCA_965112635.1

Genomics

Accession
NCBI Assembly:GCA_965112635.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.81%
  • Contamination: 0.03%
  • Quality: 97.66
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
50.0 ×
Source
Other features
  • G+C Content: 51.5%
  • Coding Density: 91.63%
  • Codon Table: 11
  • N50: 2,876,006 bp
  • Contigs: 1
  • Largest Contig: 2,876,006 bp
  • Assembly Length: 2,876,006 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
CheckM2 quality scores
Automated checks
Complete

Last modified 14 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2020-04-29
Location
Geographic Location Latitude: Not parsed: restricted access
Geographic Location Longitude: Not parsed: restricted access
View map of sampling locations
Toponym
Geographic Location Country And Or Sea: Denmark
Environment
Isolation Source: Sediment
Broad Scale Environmental Context: Freshwater
Local Environmental Context: Standing freshwater
Other
Not detected
Package
Ena Checklist: ERC000011
All retrieved samples

Metadata retrieved 14 days ago

Sequencing Experiments

PromethION sequencing
PromethION sequencing
PromethION sequencing
PromethION sequencing


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