Genome sc|0003501


Database

NCBI Assembly

Accession

GCF_041903755.1

Genomics

Accession
NCBI Assembly:GCF_041903755.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 99.58%
  • Contamination: 0.33%
  • Quality: 97.93
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
200.0 ×
Source
Other features
  • G+C Content: 63.5%
  • Coding Density: 83.66%
  • Codon Table: 11
  • N50: 147,885 bp
  • Contigs: 96
  • Largest Contig: 259,907 bp
  • Assembly Length: 6,127,461 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Last modified 5 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2019
Location
Lat Lon: 39° 58′ 47″ N, 1° 51′ 50″ W
View map of sampling locations
Toponym
Geo Loc Name: Spain: Lagunillo de Cardenillas, Cuenca
Environment
Isolation Source: freshwater biome - 3 m - C3 • freshwater biome - 0.5 m - N5
Other
Not detected
Package
Ncbi Submission Package: Metagenome.environmental.1.0
Biosamplemodel: Metagenome or environmental
All retrieved samples

Metadata retrieved 5 months ago

Sequencing Experiments

Lagunillo Cardenillas C3 3m - 0.22 micron metagenome
Lagunillo Cardenillas N5 sup - 0.22 micron metagenome


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