JSON

Genome sc|0000393

Name

Pelearchaeum maunauluenseTs

Database

NCBI Assembly

Accession

GCA_030059675.1

Genomics

Accession
NCBI Assembly:GCA_030059675.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.63%
  • Contamination: 0.97%
  • Quality: 90.78
Ribosomal and transfer RNA genes
  • 3 16S rRNAs (up to 53.0%)
  • 2 23S rRNAs (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 50.42%
  • Coding Density: 90.38%
  • Codon Table: 11
  • N50: 185,085 bp
  • Contigs: 21
  • Largest Contig: 371,327 bp
  • Assembly Length: 1,786,704 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
The total size of the three 16S rRNA gene fragments is 1439 bp. It is just that they are on different contig ends.
Automated checks
Complete
Last modified about 1 month ago

Sample Metadata

BioSample entries
Date
Collection Date: 2016-11
Location
Lat Lon: 19.370000 N 155.200000 W
Toponym
Geo Loc Name: USA: Hawaii, Mauna Ulu
Environment
Sample Type: metagenomic assembly
Isolation Source: fumarolic rock
Other
Not detected
Package
Ncbi Submission Package: Microbe.1.0 • Metagenome.environmental.1.0
Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental
All retrieved samples
Metadata retrieved about 1 month ago


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