JSON

Genome sc|0000393

Name

Pelearchaeum maunauluenseTs

Database

NCBI Assembly

Accession

GCA_030059675.1

Genomics

Accession
NCBI Assembly:GCA_030059675.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.63%
  • Contamination: 0.97%
  • Quality: 90.78
Ribosomal and transfer RNA genes
  • 3 16S rRNAs (up to 53.0%)
  • 2 23S rRNAs (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 50.42%
  • Coding Density: 90.38%
  • Codon Table: 11
  • N50: 185,085 bp
  • Contigs: 21
  • Largest Contig: 371,327 bp
  • Assembly Length: 1,786,704 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
The total size of the three 16S rRNA gene fragments is 1439 bp. It is just that they are on different contig ends.
Automated checks
Complete
Last modified 2 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2016-11
Location
Lat Lon: 19.370000 N 155.200000 W
Toponym
Geo Loc Name: USA: Hawaii, Mauna Ulu
Environment
Sample Type: metagenomic assembly
Isolation Source: fumarolic rock
Other
Not detected
Package
Ncbi Submission Package: Microbe.1.0 • Metagenome.environmental.1.0
Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental
All retrieved samples
Metadata retrieved 2 months ago


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