JSON

Genome sc|0000406

Name

Pantoea symbiotica

Database

NCBI Assembly

Accession

GCF_900114175.1

Genomics

Accession
NCBI Assembly:GCF_900114175.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 99.84%
  • Contamination: 0.91%
  • Quality: 95.29
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 18 amino acids
Sequencing depth
273.0 ×
Source
Other features
  • G+C Content: 54.57%
  • Coding Density: 89.24%
  • Codon Table: 11
  • N50: 402,499 bp
  • Contigs: 27
  • Largest Contig: 766,167 bp
  • Assembly Length: 5,277,081 bp
  • Ambiguous Assembly Fraction: 0.011%
Submitter comments
Quality assessed with CheckM v. 1. rRNA prediction performed with barrnap v. 0.9, and tRNA prediction performed with tRNAscan-SE v. 2.0.9.
Automated checks
Complete
Last modified 10 days ago

Sample Metadata

BioSample entries
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Ncbi Submission Package: MIGS.ba.6.0
Biosamplemodel: MIGS.ba
All retrieved samples
Metadata retrieved 10 days ago


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